Package org.jmol.popup
Class JmolGenericPopup
- java.lang.Object
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- org.jmol.popup.GenericSwingPopup
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- org.jmol.popup.JmolGenericPopup
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- All Implemented Interfaces:
javajs.api.GenericMenuInterface
- Direct Known Subclasses:
JmolAwtPopup
,JmolJSPopup
,JSModelKitPopup
,ModelKitPopup
public abstract class JmolGenericPopup extends GenericSwingPopup
A generic popup class that is then instantiated for a given platform and context as one of: org.jmol.popup.JmolPopup (via org.jmol.popup.SwingPopup) org.jmol.modelkit.ModelKitPopup (via org.jmol.popup.SwingPopup) org.jmol.awtjs2d.JSmolPopup (via org.jmol.awtjs2d.JSPopup) org.jmol.awtjs2d.JSModelKitPopup (via org.jmol.awtjs2d.JSPopup)
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Field Summary
Fields Modifier and Type Field Description private int
ac
private java.lang.String
altlocs
private javajs.util.Lst<javajs.api.SC>
ChargesOnly
private javajs.util.Lst<java.lang.String>
cnmrPeaks
private java.lang.String
configurationSelected
private java.lang.String
currentFrankId
private boolean
fileHasUnitCell
private javajs.util.Lst<javajs.api.SC>
FileMolOnly
private javajs.util.Lst<javajs.api.SC>
FileUnitOnly
private javajs.util.Lst<javajs.api.SC>
FramesOnly
private java.lang.Object[][]
frankList
private javajs.api.SC
frankPopup
private int[]
group3Counts
private java.lang.String
group3List
private boolean
hasSymmetry
private boolean
haveBFactors
private boolean
haveCharges
private javajs.util.Lst<java.lang.String>
hnmrPeaks
private boolean
isLastFrame
private boolean
isMultiConfiguration
private boolean
isMultiFrame
private boolean
isPDB
private boolean
isUnitCell
private boolean
isVibration
private boolean
isZapped
private int
itemMax
private static int
MENUITEM_HEIGHT
protected java.util.Properties
menuText
private int
modelCount
private int
modelIndex
private java.util.Map<java.lang.String,java.lang.Object>
modelInfo
private java.lang.String
modelSetFileName
private java.util.Map<java.lang.String,java.lang.Object>
modelSetInfo
private java.lang.String
modelSetName
private java.lang.String
modelSetRoot
private int
nFrankList
private javajs.util.Lst<javajs.api.SC>
NotPDB
private java.lang.String[]
noZapped
private java.lang.String
nullModelSetName
private javajs.util.Lst<javajs.api.SC>
PDBOnly
private javajs.util.Lst<javajs.api.SC>
SingleModelOnly
private javajs.util.Lst<javajs.api.SC>
Special
private javajs.util.Lst<javajs.api.SC>
SymmetryOnly
private javajs.util.Lst<javajs.api.SC>
TemperatureOnly
private int
titleWidthMax
private javajs.util.Lst<javajs.api.SC>
UnitcellOnly
private static int
UPDATE_ALL
private static int
UPDATE_CONFIG
protected static int
UPDATE_NEVER
private static int
UPDATE_SHOW
protected int
updateMode
private javajs.util.Lst<javajs.api.SC>
VibrationOnly
protected Viewer
vwr
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Fields inherited from class org.jmol.popup.GenericSwingPopup
allowSignedFeatures, buttonGroup, currentMenuItemId, helper, htCheckbox, htMenus, isApplet, isJS, isSigned, isTainted, isWebGL, menuName, popupMenu, strMenuStructure, thisPopup, thisx, thisy
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Constructor Summary
Constructors Constructor Description JmolGenericPopup()
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Method Summary
All Methods Instance Methods Concrete Methods Modifier and Type Method Description protected void
appCheckItem(java.lang.String item, javajs.api.SC newMenu)
protected void
appCheckSpecialMenu(java.lang.String item, javajs.api.SC subMenu, java.lang.String word)
protected java.lang.String
appFixLabel(java.lang.String label)
protected java.lang.String
appFixScript(java.lang.String id, java.lang.String script)
protected boolean
appGetBooleanProperty(java.lang.String name)
protected java.lang.String
appGetMenuAsString(java.lang.String title)
protected boolean
appIsSpecialCheckBox(javajs.api.SC item, java.lang.String basename, java.lang.String what, boolean TF)
protected void
appRestorePopupMenu()
protected void
appRunScript(java.lang.String script)
protected void
appUpdateForShow()
protected void
appUpdateSpecialCheckBoxValue(javajs.api.SC item, java.lang.String what, boolean TF)
(1) setOption --> set setOption true or set setOption falseprivate int
augmentGroup3List(javajs.api.SC menu, java.lang.String type, boolean addSeparator)
private boolean
checkBoolean(java.lang.String key)
private java.lang.String
getMenuText(java.lang.String key)
protected java.lang.String
getSpecialLabel(java.lang.String name, java.lang.String text)
menus or menu items with SPECIAL in their name are sent here for on-the-fly labelingprivate void
getViewerData()
private java.lang.String
gti(java.lang.String s, int n)
private java.lang.String
gto(java.lang.String s, java.lang.Object o)
protected void
initialize(Viewer vwr, PopupResource bundle, java.lang.String title)
void
jpiDispose()
javajs.api.SC
jpiGetMenuAsObject()
void
jpiShow(int x, int y)
void
jpiUpdateComputedMenus()
private void
setFrankMenu(java.lang.String id)
private boolean
setSecStrucMenu(javajs.api.SC menu, java.util.Map<java.lang.String,java.lang.Object> dssr)
private boolean
setSpectraMenu(javajs.api.SC menu, javajs.util.Lst<java.lang.String> peaks)
private void
updateAboutSubmenu()
private void
updateConfigurationComputedMenu()
private void
updateElementsComputedMenu(BS elementsPresentBitSet)
private void
updateFileMenu()
private void
updateFileTypeDependentMenus()
private void
updateFRAMESbyModelComputedMenu()
private int
updateGroup3List(javajs.api.SC menu, java.lang.String name)
private void
updateHeteroComputedMenu(java.util.Map<java.lang.String,java.lang.String> htHetero)
private void
updateLanguageSubmenu()
private void
updateModelSetComputedMenu()
private void
updatePDBComputedMenus()
private void
updateSceneComputedMenu()
private void
updateSelectMenu()
private void
updateSpecialMenuItem(javajs.api.SC m)
private void
updateSpectraMenu()
private void
updateSurfMoComputedMenu(java.util.Map<java.lang.String,java.lang.Object> moData)
private void
updateSYMMETRYComputedMenus()
private void
updateSYMMETRYSelectComputedMenu()
private void
updateSYMMETRYShowComputedMenu()
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Methods inherited from class org.jmol.popup.GenericSwingPopup
addMenuItem, addMenuItems, convertToMegabytes, getEntryIcon, getImageIcon, initSwing, jpiGetMenuAsString, menuAddSeparator, menuAddSubMenu, menuCheckBoxCallback, menuClickCallback, menuCreateCheckboxItem, menuCreateItem, menuEnable, menuGetId, menuGetListPosition, menuNewSubMenu, menuRemoveAll, menuSetAutoscrolls, menuSetCheckBoxOption, menuSetLabel, menuShowPopup, processClickCallback, setText, show, updateButton, updateSignedAppletItems
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Field Detail
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UPDATE_NEVER
protected static final int UPDATE_NEVER
- See Also:
- Constant Field Values
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UPDATE_ALL
private static final int UPDATE_ALL
- See Also:
- Constant Field Values
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UPDATE_CONFIG
private static final int UPDATE_CONFIG
- See Also:
- Constant Field Values
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UPDATE_SHOW
private static final int UPDATE_SHOW
- See Also:
- Constant Field Values
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vwr
protected Viewer vwr
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updateMode
protected int updateMode
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menuText
protected java.util.Properties menuText
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frankPopup
private javajs.api.SC frankPopup
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nFrankList
private int nFrankList
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itemMax
private int itemMax
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titleWidthMax
private int titleWidthMax
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nullModelSetName
private java.lang.String nullModelSetName
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modelSetName
private java.lang.String modelSetName
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modelSetFileName
private java.lang.String modelSetFileName
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modelSetRoot
private java.lang.String modelSetRoot
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currentFrankId
private java.lang.String currentFrankId
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configurationSelected
private java.lang.String configurationSelected
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altlocs
private java.lang.String altlocs
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frankList
private java.lang.Object[][] frankList
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modelSetInfo
private java.util.Map<java.lang.String,java.lang.Object> modelSetInfo
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modelInfo
private java.util.Map<java.lang.String,java.lang.Object> modelInfo
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NotPDB
private javajs.util.Lst<javajs.api.SC> NotPDB
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PDBOnly
private javajs.util.Lst<javajs.api.SC> PDBOnly
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FileUnitOnly
private javajs.util.Lst<javajs.api.SC> FileUnitOnly
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FileMolOnly
private javajs.util.Lst<javajs.api.SC> FileMolOnly
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UnitcellOnly
private javajs.util.Lst<javajs.api.SC> UnitcellOnly
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SingleModelOnly
private javajs.util.Lst<javajs.api.SC> SingleModelOnly
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FramesOnly
private javajs.util.Lst<javajs.api.SC> FramesOnly
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VibrationOnly
private javajs.util.Lst<javajs.api.SC> VibrationOnly
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Special
private javajs.util.Lst<javajs.api.SC> Special
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SymmetryOnly
private javajs.util.Lst<javajs.api.SC> SymmetryOnly
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ChargesOnly
private javajs.util.Lst<javajs.api.SC> ChargesOnly
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TemperatureOnly
private javajs.util.Lst<javajs.api.SC> TemperatureOnly
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fileHasUnitCell
private boolean fileHasUnitCell
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haveBFactors
private boolean haveBFactors
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haveCharges
private boolean haveCharges
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isLastFrame
private boolean isLastFrame
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isMultiConfiguration
private boolean isMultiConfiguration
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isMultiFrame
private boolean isMultiFrame
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isPDB
private boolean isPDB
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hasSymmetry
private boolean hasSymmetry
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isUnitCell
private boolean isUnitCell
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isVibration
private boolean isVibration
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isZapped
private boolean isZapped
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modelIndex
private int modelIndex
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modelCount
private int modelCount
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ac
private int ac
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group3List
private java.lang.String group3List
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group3Counts
private int[] group3Counts
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cnmrPeaks
private javajs.util.Lst<java.lang.String> cnmrPeaks
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hnmrPeaks
private javajs.util.Lst<java.lang.String> hnmrPeaks
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MENUITEM_HEIGHT
private static final int MENUITEM_HEIGHT
- See Also:
- Constant Field Values
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noZapped
private final java.lang.String[] noZapped
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Method Detail
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initialize
protected void initialize(Viewer vwr, PopupResource bundle, java.lang.String title)
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jpiDispose
public void jpiDispose()
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jpiGetMenuAsObject
public javajs.api.SC jpiGetMenuAsObject()
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jpiShow
public void jpiShow(int x, int y)
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jpiUpdateComputedMenus
public void jpiUpdateComputedMenus()
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appCheckItem
protected void appCheckItem(java.lang.String item, javajs.api.SC newMenu)
- Specified by:
appCheckItem
in classGenericSwingPopup
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appFixLabel
protected java.lang.String appFixLabel(java.lang.String label)
- Specified by:
appFixLabel
in classGenericSwingPopup
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appFixScript
protected java.lang.String appFixScript(java.lang.String id, java.lang.String script)
- Specified by:
appFixScript
in classGenericSwingPopup
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appGetBooleanProperty
protected boolean appGetBooleanProperty(java.lang.String name)
- Specified by:
appGetBooleanProperty
in classGenericSwingPopup
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appGetMenuAsString
protected java.lang.String appGetMenuAsString(java.lang.String title)
- Specified by:
appGetMenuAsString
in classGenericSwingPopup
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appIsSpecialCheckBox
protected boolean appIsSpecialCheckBox(javajs.api.SC item, java.lang.String basename, java.lang.String what, boolean TF)
- Specified by:
appIsSpecialCheckBox
in classGenericSwingPopup
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appRestorePopupMenu
protected void appRestorePopupMenu()
- Specified by:
appRestorePopupMenu
in classGenericSwingPopup
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appRunScript
protected void appRunScript(java.lang.String script)
- Specified by:
appRunScript
in classGenericSwingPopup
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appUpdateSpecialCheckBoxValue
protected void appUpdateSpecialCheckBoxValue(javajs.api.SC item, java.lang.String what, boolean TF)
(1) setOption --> set setOption true or set setOption false- Specified by:
appUpdateSpecialCheckBoxValue
in classGenericSwingPopup
- Parameters:
item
-what
- option to setTF
- true or false
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setFrankMenu
private void setFrankMenu(java.lang.String id)
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checkBoolean
private boolean checkBoolean(java.lang.String key)
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getViewerData
private void getViewerData()
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appCheckSpecialMenu
protected void appCheckSpecialMenu(java.lang.String item, javajs.api.SC subMenu, java.lang.String word)
- Specified by:
appCheckSpecialMenu
in classGenericSwingPopup
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appUpdateForShow
protected void appUpdateForShow()
- Specified by:
appUpdateForShow
in classGenericSwingPopup
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updateFileMenu
private void updateFileMenu()
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getMenuText
private java.lang.String getMenuText(java.lang.String key)
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updateSelectMenu
private void updateSelectMenu()
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updateElementsComputedMenu
private void updateElementsComputedMenu(BS elementsPresentBitSet)
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updateSpectraMenu
private void updateSpectraMenu()
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setSpectraMenu
private boolean setSpectraMenu(javajs.api.SC menu, javajs.util.Lst<java.lang.String> peaks)
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updateHeteroComputedMenu
private void updateHeteroComputedMenu(java.util.Map<java.lang.String,java.lang.String> htHetero)
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updateSurfMoComputedMenu
private void updateSurfMoComputedMenu(java.util.Map<java.lang.String,java.lang.Object> moData)
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updateFileTypeDependentMenus
private void updateFileTypeDependentMenus()
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updateSceneComputedMenu
private void updateSceneComputedMenu()
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updatePDBComputedMenus
private void updatePDBComputedMenus()
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setSecStrucMenu
private boolean setSecStrucMenu(javajs.api.SC menu, java.util.Map<java.lang.String,java.lang.Object> dssr)
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updateGroup3List
private int updateGroup3List(javajs.api.SC menu, java.lang.String name)
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augmentGroup3List
private int augmentGroup3List(javajs.api.SC menu, java.lang.String type, boolean addSeparator)
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updateSYMMETRYComputedMenus
private void updateSYMMETRYComputedMenus()
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updateSYMMETRYShowComputedMenu
private void updateSYMMETRYShowComputedMenu()
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updateSYMMETRYSelectComputedMenu
private void updateSYMMETRYSelectComputedMenu()
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updateFRAMESbyModelComputedMenu
private void updateFRAMESbyModelComputedMenu()
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updateConfigurationComputedMenu
private void updateConfigurationComputedMenu()
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updateModelSetComputedMenu
private void updateModelSetComputedMenu()
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gti
private java.lang.String gti(java.lang.String s, int n)
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gto
private java.lang.String gto(java.lang.String s, java.lang.Object o)
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updateAboutSubmenu
private void updateAboutSubmenu()
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updateLanguageSubmenu
private void updateLanguageSubmenu()
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updateSpecialMenuItem
private void updateSpecialMenuItem(javajs.api.SC m)
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getSpecialLabel
protected java.lang.String getSpecialLabel(java.lang.String name, java.lang.String text)
menus or menu items with SPECIAL in their name are sent here for on-the-fly labeling- Parameters:
name
-text
-- Returns:
- revised text
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