Package pal.substmodel
Class RateMatrixUtils
- java.lang.Object
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- pal.substmodel.RateMatrixUtils
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public class RateMatrixUtils extends java.lang.Object
- Version:
- $Id: RateMatrixUtils.java,v 1.2 2001/07/13 14:39:13 korbinian Exp $
- Author:
- Korbinian Strimmer, Alexei Drummond, Matthew Goode
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Constructor Summary
Constructors Constructor Description RateMatrixUtils()
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Method Summary
All Methods Static Methods Concrete Methods Modifier and Type Method Description static RateMatrix[]
getCopy(RateMatrix[] toCopy)
static RateMatrix
getInstance(int typeID, int modelID, double[] params, double[] freq)
Create rate matrix given model and data type codes
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Method Detail
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getInstance
public static RateMatrix getInstance(int typeID, int modelID, double[] params, double[] freq)
Create rate matrix given model and data type codes- Parameters:
typeID
- code for data typemodelID
- code for model of substitutionparams
- model parametersfreq
- model frequencies- Returns:
- rate matrix
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getCopy
public static final RateMatrix[] getCopy(RateMatrix[] toCopy)
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