Package pal.misc
Interface Report
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- All Known Subinterfaces:
AnnotationAlignment
,CharacterAlignment
,RateMatrix
,SubstitutionModel
- All Known Implementing Classes:
AbstractAlignment
,AbstractRateMatrix
,AminoAcidModel
,BLOSUM62
,BootstrappedAlignment
,CachedRateMatrix
,ClusterTree
,CoalescentIntervals
,CodonModel
,ConcatenatedAlignment
,ConcatenatedAnnotatedAlignment
,ConstantMutationRate
,ConstantPopulation
,ConstExpConst
,ConstExpGrowth
,CPREV
,Dayhoff
,DemographicModel
,ExpandingPopulation
,ExponentialGrowth
,F81
,F84
,GammaRates
,GapBalancedAlignment
,GeneralRateDistributionSubstitutionModel
,GTR
,HKY
,IndelAlignment
,IndelAnnotatedAlignment
,InvariableSites
,JTT
,JumbledAlignment
,KishinoHasegawaTest
,ModelSupport
,MTREV24
,MultiLocusAnnotatedAlignment
,MutationRateModel
,NeighborJoiningTree
,NucleotideModel
,RateDistribution
,ReadAlignment
,ReadAlignmentOld
,ReadTree
,ShimodairaHasegawaTest
,SimpleAlignment
,SimpleAnnotatedAlignment
,SimpleCharacterAlignment
,SimpleTree
,SimulatedAlignment
,SingleClassSubstitutionModel
,SitePattern
,SkylinePlot
,SteppedMutationRate
,StrippedAlignment
,StrippedAnnotatedAlignment
,SUPGMATree
,TN
,Tree.TreeBase
,TwoStateModel
,UniformRate
,UPGMATree
,VT
,WAG
,WindowedMutationRate
,YangCodonModel
,YangCodonModel.SimpleNeutralSelection
,YangCodonModel.SimplePositiveSelection
public interface Report
interface for classes that can print out a human readable report of itself- Version:
- $Id: Report.java,v 1.4 2002/12/05 04:27:28 matt Exp $
- Author:
- Korbinian Strimmer
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Method Summary
All Methods Instance Methods Abstract Methods Modifier and Type Method Description void
report(java.io.PrintWriter out)
print human readable report (e.g., on parameters and associated model)
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