Uses of Interface
pal.treesearch.ConstraintModel.GroupManager
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Packages that use ConstraintModel.GroupManager Package Description pal.treesearch -
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Uses of ConstraintModel.GroupManager in pal.treesearch
Classes in pal.treesearch that implement ConstraintModel.GroupManager Modifier and Type Class Description class
FixedBSRDTGlobalClockModel
class
FixedSRDTGlobalClockModel
class
GlobalClockModel
class
MRDTGlobalClockModel
class
SRDTGlobalClockModel
Methods in pal.treesearch that return ConstraintModel.GroupManager Modifier and Type Method Description ConstraintModel.GroupManager
ConstraintModel. getGlobalClockConstraintGrouping(java.lang.String[] leafLabelSet)
Enquire about the clock constraint grouping of the leafConstraintModel.GroupManager
FixedBSRDTGlobalClockModel. getGlobalClockConstraintGrouping(java.lang.String[] leafLabelSet)
ConstraintModel.GroupManager
FixedSRDTGlobalClockModel. getGlobalClockConstraintGrouping(java.lang.String[] leafLabelSet)
ConstraintModel.GroupManager
GlobalClockModel. getGlobalClockConstraintGrouping(java.lang.String[] leafLabelSet)
ConstraintModel.GroupManager
MRDTGlobalClockModel. getGlobalClockConstraintGrouping(java.lang.String[] leafLabelSet)
ConstraintModel.GroupManager
SRDTGlobalClockModel. getGlobalClockConstraintGrouping(java.lang.String[] leafLabelSet)
ConstraintModel.GroupManager
UnconstrainedModel. getGlobalClockConstraintGrouping(java.lang.String[] leafLabelSet)
ConstraintModel.GroupManager
GeneralConstraintGroupManager. getRelatedGroup()
Methods in pal.treesearch with parameters of type ConstraintModel.GroupManager Modifier and Type Method Description Node
AbstractParentableConstrainedNode. buildDescendentPALNodeES(ConstraintModel.GroupManager groupManager)
Node
ConstrainedLeafNode. buildDescendentPALNodeES(ConstraintModel.GroupManager groupManager)
Node
ConstrainedNode. buildDescendentPALNodeES(ConstraintModel.GroupManager groupConstraints)
Build node with Expected Substitution Unitsprotected MolecularClockLikelihoodModel.Leaf
AbstractLeafNode. createNewConstrainedLeafCalculator(ConstraintModel.GroupManager parentGroup)
GeneralConstraintGroupManager
GeneralConstraintGroupManager.Store. getConstraintGroupManager(ConstraintModel.GroupManager grouping)
boolean
GeneralConstraintGroupManager. isSameGroup(ConstraintModel.GroupManager queryGroup)
void
GroupLeader. postSetupNotify(ConstraintModel.GroupManager groupConstraints)
Tell the group leader that the groupConstraints have been set up (parameter wise), and that internal node heights for example may be calculatedvoid
PivotNode. postSetupNotify(ConstraintModel.GroupManager groupConstraints)
void
AbstractParentableConstrainedNode. setupInternalNodeHeights(ConstraintModel.GroupManager groupConstraints)
void
ConstrainedLeafNode. setupInternalNodeHeights(ConstraintModel.GroupManager groupConstraints)
void
ConstrainedNode. setupInternalNodeHeights(ConstraintModel.GroupManager groupConstraints)
Constructors in pal.treesearch with parameters of type ConstraintModel.GroupManager Constructor Description ConstrainedLeafNode(ParentableConstrainedNode parentNode, Node peer, double height, GeneralConstructionTool tool, ConstraintModel.GroupManager parentGroup)
GeneralConstraintGroupManager(ConstraintModel.GroupManager relatedGroup)
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