Package pal.supgma
Interface ThetaHandler
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public interface ThetaHandler
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Nested Class Summary
Nested Classes Modifier and Type Interface Description static class
ThetaHandler.Utils
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Method Summary
All Methods Instance Methods Abstract Methods Modifier and Type Method Description void
adjustDistances(double[][] matrix, TimeOrderCharacterData tocd)
boolean
canGenerateDemogrpahicModel()
void
fillInLSInfo(double[] mRow, int startingIndex, int minSample, int maxSample)
DemographicModel
generateDemographicModel(double[] deltas, double[] thetas, TimeOrderCharacterData tocd)
May return null if not possible to infer demographic modeljava.lang.String
getInfo()
int
getNumberOfParameters(TimeOrderCharacterData tocd)
boolean
isCICompatible()
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Method Detail
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getNumberOfParameters
int getNumberOfParameters(TimeOrderCharacterData tocd)
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adjustDistances
void adjustDistances(double[][] matrix, TimeOrderCharacterData tocd)
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isCICompatible
boolean isCICompatible()
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getInfo
java.lang.String getInfo()
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fillInLSInfo
void fillInLSInfo(double[] mRow, int startingIndex, int minSample, int maxSample)
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generateDemographicModel
DemographicModel generateDemographicModel(double[] deltas, double[] thetas, TimeOrderCharacterData tocd)
May return null if not possible to infer demographic model
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canGenerateDemogrpahicModel
boolean canGenerateDemogrpahicModel()
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