Uses of Class
pal.treesearch.UnrootedMLSearcher
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Packages that use UnrootedMLSearcher Package Description pal.treesearch -
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Uses of UnrootedMLSearcher in pal.treesearch
Methods in pal.treesearch that return UnrootedMLSearcher Modifier and Type Method Description UnrootedMLSearcher
BranchAccess. attach(java.lang.String newSequence, Alignment fullAlignment)
Create a new Tree Searcher with a new sub tree attachedUnrootedMLSearcher
BranchAccess. attach(java.lang.String newSequence, Alignment fullAlignment, SubstitutionModel model)
Create a new Tree Searcher with a new sub tree attachedUnrootedMLSearcher
BranchAccess. attach(Node subTree, Alignment fullAlignment)
Create a new Tree Searcher with a new sub tree attachedUnrootedMLSearcher
BranchAccess. attach(Node subTree, Alignment fullAlignment, SubstitutionModel model)
Create a new Tree Searcher with a new sub tree attached
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