Uses of Interface
pal.statistics.ReplicateLikelihoodEvaluator
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Packages that use ReplicateLikelihoodEvaluator Package Description pal.statistics Classes with useful for statistics (normal distribution, Gamma distribution, chi-square distribution, exponential distribution, likelihood-ratio test, chi-square test, descriptive statistics, bootstrap estimators etc.) -
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Uses of ReplicateLikelihoodEvaluator in pal.statistics
Methods in pal.statistics that return ReplicateLikelihoodEvaluator Modifier and Type Method Description static ReplicateLikelihoodEvaluator
ReplicateLikelihoodEvaluator.Utils. createRELLEvaluator(SubstitutionModel model)
Create a ReplicateLikelihoodEvaluator that based likelihood on original tree (does no optimisation)Constructors in pal.statistics with parameters of type ReplicateLikelihoodEvaluator Constructor Description GeneralTopologyPool(Tree[] topologies, LikelihoodEvaluator baseCalculator, ReplicateLikelihoodEvaluator replicateCalculator, Alignment baseAlignment, AlignmentGenerator replicateGenerator)
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