Package pal.datatype

Class SpecificAminoAcids

  • All Implemented Interfaces:
    java.io.Serializable, DataType, MolecularDataType

    public class SpecificAminoAcids
    extends AminoAcids
    implements MolecularDataType
    implements a MolecularDataType for amino acids, where we specifiy the Codon Table basis of amino acid by supplying the CodonTable which is/was used for converting Nucleotide sequences to Amino Acids. We need this table to do conversion between Nucleotides and Amino Acids (and vice versa)
    Version:
    $Id: SpecificAminoAcids.java,v 1.8 2004/10/29 01:13:37 matt Exp $
    Author:
    Matthew Goode
    See Also:
    Serialized Form
    • Constructor Detail

      • SpecificAminoAcids

        public SpecificAminoAcids()
        Creates with Universal Codon Table
      • SpecificAminoAcids

        public SpecificAminoAcids​(CodonTable translationTable)
      • SpecificAminoAcids

        public SpecificAminoAcids​(int organismTypeID)