Interface TopologyTestEngine.StatisticsHandler

    • Method Summary

      All Methods Instance Methods Abstract Methods 
      Modifier and Type Method Description
      double[] getOriginalTestStatistics​(double[] originalOptimisedLogLikelihoods, int numberOfTopologies)  
      double[] getPValues​(double[] originalOptimisedLogLikelihoods, double[][] replicateLogLikelihoods, int numberOfReplicates, int numberOfTopologies)  
    • Method Detail

      • getOriginalTestStatistics

        double[] getOriginalTestStatistics​(double[] originalOptimisedLogLikelihoods,
                                           int numberOfTopologies)
      • getPValues

        double[] getPValues​(double[] originalOptimisedLogLikelihoods,
                            double[][] replicateLogLikelihoods,
                            int numberOfReplicates,
                            int numberOfTopologies)
        Parameters:
        originalOptimisedLogLikelihoods - stored as [topology]
        replicateLogLikelihoods - store as [replicate][topology]
        numberOfTopologies - the number of topologies
        numberOfTopologies - the number of replicates
        Returns: