Package pal.eval
Interface MolecularClockLikelihoodModel.Leaf
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- Enclosing interface:
- MolecularClockLikelihoodModel
public static interface MolecularClockLikelihoodModel.Leaf
A ConstrainedLHCalculator.Leaf object is attached to each leaf node and can be used to calculated conditional probabilities across the related branch. Allows for quick implementations as well as implementations that cope correctly with ambiguous characters
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Method Summary
All Methods Instance Methods Abstract Methods Modifier and Type Method Description ConditionalProbabilityStore
calculateExtendedConditionals(double topHeight, double bottomHeight)
ConditionalProbabilityStore
calculateFlatConditionals(double height)
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Method Detail
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calculateExtendedConditionals
ConditionalProbabilityStore calculateExtendedConditionals(double topHeight, double bottomHeight)
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calculateFlatConditionals
ConditionalProbabilityStore calculateFlatConditionals(double height)
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