Package pal.substmodel
Interface SingleSplitDistribution
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- All Superinterfaces:
NeoParameterized
- All Known Implementing Classes:
ConstantIndependentSingleSplitDistribution
,SaturatedSingleSplitDistribution
,VariableIndependentSingleSplitDistribution
public interface SingleSplitDistribution extends NeoParameterized
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Method Summary
All Methods Instance Methods Abstract Methods Modifier and Type Method Description double[][]
getDistributionInfo()
Obtain the distribution information stored in the following format: [beforeclass][afterclass] For example, the probability of evolving in class 0 before the split, and class 1 after the split - [0][1]int
getNumberOfBaseTransitionCategories()
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Methods inherited from interface pal.misc.NeoParameterized
getDefaultValues, getLowerLimit, getNumberOfParameters, getParameters, getUpperLimit, setParameters
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Method Detail
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getNumberOfBaseTransitionCategories
int getNumberOfBaseTransitionCategories()
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getDistributionInfo
double[][] getDistributionInfo()
Obtain the distribution information stored in the following format: [beforeclass][afterclass] For example, the probability of evolving in class 0 before the split, and class 1 after the split - [0][1]- Returns:
- an appropriate matrix representing the probability of evolving in the different combinations of before and after classes
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