Package pal.eval

Interface UnconstrainedLikelihoodModel.Leaf

  • All Known Implementing Classes:
    SimpleUnconstrainedLikelihoodModel.LeafImpl
    Enclosing interface:
    UnconstrainedLikelihoodModel

    public static interface UnconstrainedLikelihoodModel.Leaf
    A LHCalculator.Leaf object is attached to each leaf node and can be used to calculated conditional probabilities across the related branch. Allows for quick implementations as well as implementations that cope correctly with ambiguous characters
    • Method Detail

      • getCopy

        UnconstrainedLikelihoodModel.Leaf getCopy()
        Create a new Leaf calculator that has exactly the same properties as this one (but is different such that it may be used independently)
        Returns:
        a copy of this leaf calculator