Package pal.mep

Class DeltaModel.Utils

  • Enclosing interface:
    DeltaModel

    public static final class DeltaModel.Utils
    extends java.lang.Object
    • Constructor Detail

      • Utils

        public Utils()
    • Method Detail

      • getMutationRateModelBased

        public static final DeltaModel getMutationRateModelBased​(MutationRateModel.Factory mepFactory)
        For interfacing with time based mutation rate models
      • getUntimedBased

        public static final DeltaModel getUntimedBased()
        For serial sampled analysis when no time information is available.
      • getUntimedBased

        public static final DeltaModel getUntimedBased​(double[] initalDeltas)
        For serial sampled analysis when no time information is available.
        Parameters:
        initialDeltas - , if not of required length (for given tocd) uses subset (or sets remainder to zero)