Uses of Class
pal.substmodel.CodonModel
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Packages that use CodonModel Package Description pal.substmodel Classes describing substitution models, i.e. -
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Uses of CodonModel in pal.substmodel
Subclasses of CodonModel in pal.substmodel Modifier and Type Class Description class
YangCodonModel
Yang's model of codon evolution More advanced codon Substitution Models (of Neilson and Yang) are now included (the M1, and M2 models).Methods in pal.substmodel that return CodonModel Modifier and Type Method Description static CodonModel
CodonModel. getInstance(int modelID, double[] params, double[] freq)
Create codon substitution model according to model type
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