Package uk.ac.cam.ch.wwmm.opsin
Class ComponentProcessorTest
- java.lang.Object
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- uk.ac.cam.ch.wwmm.opsin.ComponentProcessorTest
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public class ComponentProcessorTest extends java.lang.Object
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Constructor Summary
Constructors Constructor Description ComponentProcessorTest()
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Method Summary
All Methods Instance Methods Concrete Methods Modifier and Type Method Description void
testDLStereochemistryDLOnAminoAcid()
void
testDLStereochemistryDOnAchiralAminoAcid()
void
testDLStereochemistryDOnAminoAcid()
void
testDLStereochemistryDOnCarbohydrate()
void
testDLStereochemistryDOnCarbohydratePrefix()
void
testDLStereochemistryInvertedNaturalOnCarbohydrate1()
void
testDLStereochemistryInvertedNaturalOnCarbohydrate2()
void
testDLStereochemistryLOnAminoAcid()
void
testDLStereochemistryLOnCarbohydrate()
void
testDStereochemistryDOnCarbohydratePrefix()
void
testLStereochemistryDOnCarbohydratePrefix()
void
testSubtractiveBiochemicalPreferredToRightMost()
void
testSubtractiveRightMostPreferred()
void
testSubtractiveWithBiochemicalToAttachTo()
void
testSubtractiveWithMultiplierAndLocants()
void
testSubtractiveWithNoGroupToAttachTo()
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Method Detail
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testSubtractiveWithNoGroupToAttachTo
public void testSubtractiveWithNoGroupToAttachTo() throws uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException
- Throws:
uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException
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testSubtractiveWithBiochemicalToAttachTo
public void testSubtractiveWithBiochemicalToAttachTo() throws uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException
- Throws:
uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException
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testSubtractiveRightMostPreferred
public void testSubtractiveRightMostPreferred() throws uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException
- Throws:
uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException
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testSubtractiveBiochemicalPreferredToRightMost
public void testSubtractiveBiochemicalPreferredToRightMost() throws uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException
- Throws:
uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException
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testSubtractiveWithMultiplierAndLocants
public void testSubtractiveWithMultiplierAndLocants() throws uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException
- Throws:
uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException
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testDLStereochemistryLOnAminoAcid
public void testDLStereochemistryLOnAminoAcid() throws uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException, uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
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testDLStereochemistryDOnAminoAcid
public void testDLStereochemistryDOnAminoAcid() throws uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException, uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
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testDLStereochemistryDLOnAminoAcid
public void testDLStereochemistryDLOnAminoAcid() throws uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException, uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
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testDLStereochemistryDOnAchiralAminoAcid
public void testDLStereochemistryDOnAchiralAminoAcid() throws uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException, uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
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testDLStereochemistryLOnCarbohydrate
public void testDLStereochemistryLOnCarbohydrate() throws uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException, uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
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testDLStereochemistryDOnCarbohydrate
public void testDLStereochemistryDOnCarbohydrate() throws uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException, uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
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testDLStereochemistryInvertedNaturalOnCarbohydrate1
public void testDLStereochemistryInvertedNaturalOnCarbohydrate1() throws uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException, uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
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testDLStereochemistryInvertedNaturalOnCarbohydrate2
public void testDLStereochemistryInvertedNaturalOnCarbohydrate2() throws uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException, uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
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testDStereochemistryDOnCarbohydratePrefix
public void testDStereochemistryDOnCarbohydratePrefix() throws uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException, uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
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testLStereochemistryDOnCarbohydratePrefix
public void testLStereochemistryDOnCarbohydratePrefix() throws uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException, uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
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testDLStereochemistryDOnCarbohydratePrefix
public void testDLStereochemistryDOnCarbohydratePrefix() throws uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException, uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
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