Package uk.ac.cam.ch.wwmm.opsin
Class FragmentTest
- java.lang.Object
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- uk.ac.cam.ch.wwmm.opsin.FragmentTest
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public class FragmentTest extends java.lang.Object
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Constructor Summary
Constructors Constructor Description FragmentTest()
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Method Summary
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Method Detail
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setUp
public void setUp()
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testFragment
public void testFragment()
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testAddAtom
public void testAddAtom()
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testAddBond
public void testAddBond()
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testImportFrag
public void testImportFrag() throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
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testImportFragWithIntraFragBonds1
public void testImportFragWithIntraFragBonds1() throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
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testImportFragWithIntraFragBonds2
public void testImportFragWithIntraFragBonds2() throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
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testGetIDFromLocant
public void testGetIDFromLocant()
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testGetAtomByLocant
public void testGetAtomByLocant()
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testGetAtomByID
public void testGetAtomByID()
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testFindBond
public void testFindBond()
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testGetChainLength
public void testGetChainLength()
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testRelabelSuffixLocants
public void testRelabelSuffixLocants() throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
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testLabelCarbamimidamido
public void testLabelCarbamimidamido() throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
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testLabelHydrazonoHydrazide
public void testLabelHydrazonoHydrazide() throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
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testLabelCarbonimidoyl
public void testLabelCarbonimidoyl() throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
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testLabelHydrazonicAmide
public void testLabelHydrazonicAmide() throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
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testLabelHydrazonate
public void testLabelHydrazonate() throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
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testLabelHexanDiamide
public void testLabelHexanDiamide() throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
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testLabelDiimidooxalicDiamide
public void testLabelDiimidooxalicDiamide() throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
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testLabelHydrazinecarbohydrazide
public void testLabelHydrazinecarbohydrazide() throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
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testLabelCarbonicDihydrazide
public void testLabelCarbonicDihydrazide() throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
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testLabelSulfonoThioate
public void testLabelSulfonoThioate() throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
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testLabelAcetoanilide
public void testLabelAcetoanilide() throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
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testLabelPyridine
public void testLabelPyridine() throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
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testLabelPiperazine
public void testLabelPiperazine() throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
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testLabelCarboximidohydrazide
public void testLabelCarboximidohydrazide() throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
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testIndicatedHydrogen
public void testIndicatedHydrogen() throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
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testSpareValenciesOnAromaticAtoms
public void testSpareValenciesOnAromaticAtoms() throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
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testConvertSpareValenciesToDoubleBonds
public void testConvertSpareValenciesToDoubleBonds() throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
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testGetAtomNeighbours
public void testGetAtomNeighbours() throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
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testIsCharacteristicAtomSuffix
public void testIsCharacteristicAtomSuffix() throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
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testIsCharacteristicAtomAldehyde
public void testIsCharacteristicAtomAldehyde() throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
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testIsCharacteristicAtomFunctionalAtom
public void testIsCharacteristicAtomFunctionalAtom() throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
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testIsCharacteristicAtomHydroxy
public void testIsCharacteristicAtomHydroxy() throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
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