Class LeaveOneOutTesterMain
- java.lang.Object
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- edu.msu.cme.rdp.classifier.train.validation.leaveoneout.LeaveOneOutTesterMain
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public class LeaveOneOutTesterMain extends java.lang.Object
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Field Summary
Fields Modifier and Type Field Description static java.lang.String
HIDETAXON_SHORT_OPT
static java.lang.String
LENGTH_DESC
static java.lang.String
LENGTH_LONG_OPT
static java.lang.String
LENGTH_SHORT_OPT
static java.lang.String
OUTFILE_DESC
static java.lang.String
OUTFILE_LONG_OPT
static java.lang.String
OUTFILE_SHORT_OPT
static java.lang.String
QUERYFILE_DESC
static java.lang.String
QUERYFILE_LONG_OPT
static java.lang.String
QUERYFILE_SHORT_OPT
static java.lang.String
TRAIN_SEQFILE_DESC
static java.lang.String
TRAIN_SEQFILE_LONG_OPT
static java.lang.String
TRAIN_SEQFILE_SHORT_OPT
static java.lang.String
TRAIN_TAXONFILE_DESC
static java.lang.String
TRAIN_TAXONFILE_LONG_OPT
static java.lang.String
TRAIN_TAXONFILE_SHORT_OPT
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Constructor Summary
Constructors Constructor Description LeaveOneOutTesterMain(java.lang.String taxFile, java.lang.String trainseqFile, java.lang.String testFile, java.lang.String outFile, int numGoodBases, int min_bootstrap_words, boolean hideTaxon)
Creates a new Classification
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Method Summary
All Methods Static Methods Concrete Methods Modifier and Type Method Description static void
main(java.lang.String[] args)
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Field Detail
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QUERYFILE_LONG_OPT
public static final java.lang.String QUERYFILE_LONG_OPT
- See Also:
- Constant Field Values
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OUTFILE_LONG_OPT
public static final java.lang.String OUTFILE_LONG_OPT
- See Also:
- Constant Field Values
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TRAIN_SEQFILE_LONG_OPT
public static final java.lang.String TRAIN_SEQFILE_LONG_OPT
- See Also:
- Constant Field Values
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TRAIN_TAXONFILE_LONG_OPT
public static final java.lang.String TRAIN_TAXONFILE_LONG_OPT
- See Also:
- Constant Field Values
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LENGTH_LONG_OPT
public static final java.lang.String LENGTH_LONG_OPT
- See Also:
- Constant Field Values
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QUERYFILE_SHORT_OPT
public static final java.lang.String QUERYFILE_SHORT_OPT
- See Also:
- Constant Field Values
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OUTFILE_SHORT_OPT
public static final java.lang.String OUTFILE_SHORT_OPT
- See Also:
- Constant Field Values
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TRAIN_SEQFILE_SHORT_OPT
public static final java.lang.String TRAIN_SEQFILE_SHORT_OPT
- See Also:
- Constant Field Values
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TRAIN_TAXONFILE_SHORT_OPT
public static final java.lang.String TRAIN_TAXONFILE_SHORT_OPT
- See Also:
- Constant Field Values
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LENGTH_SHORT_OPT
public static final java.lang.String LENGTH_SHORT_OPT
- See Also:
- Constant Field Values
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HIDETAXON_SHORT_OPT
public static final java.lang.String HIDETAXON_SHORT_OPT
- See Also:
- Constant Field Values
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TRAIN_SEQFILE_DESC
public static final java.lang.String TRAIN_SEQFILE_DESC
- See Also:
- Constant Field Values
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TRAIN_TAXONFILE_DESC
public static final java.lang.String TRAIN_TAXONFILE_DESC
- See Also:
- Constant Field Values
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LENGTH_DESC
public static final java.lang.String LENGTH_DESC
- See Also:
- Constant Field Values
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QUERYFILE_DESC
public static final java.lang.String QUERYFILE_DESC
- See Also:
- Constant Field Values
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OUTFILE_DESC
public static final java.lang.String OUTFILE_DESC
- See Also:
- Constant Field Values
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Constructor Detail
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LeaveOneOutTesterMain
public LeaveOneOutTesterMain(java.lang.String taxFile, java.lang.String trainseqFile, java.lang.String testFile, java.lang.String outFile, int numGoodBases, int min_bootstrap_words, boolean hideTaxon) throws java.io.IOException
Creates a new Classification- Throws:
java.io.IOException
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